The serial killer was the subject of taunts by Chester supporters to fans of Hereford, where she was born.
Chester lost 2-1 to Hereford in the National North League game on Tuesday at the Deva Stadium.
Vice Chairman Jim Green said: "Chester FC condemns the appalling chant heard during our match with Hereford. "It is reprehensible behaviour and demonstrates a deeply concerning lack of compassion, understanding and decency."
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