Cryo-EM reveals structural dynamics of RNAP-DNA interactions during transcription initiation

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Cryo-EM reveals structural dynamics of RNAP-DNA interactions during transcription initiation
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Every living cell transcribes DNA into RNA. This process begins when an enzyme called RNA polymerase (RNAP) clamps onto DNA. Within a few hundred milliseconds, the DNA double helix unwinds to form a node known as the transcription bubble, so that one exposed DNA strand can be copied into a complementary RNA strand.

Rockefeller UniversityJul 10 2024 Every living cell transcribes DNA into RNA . This process begins when an enzyme called RNA polymerase clamps onto DNA . Within a few hundred milliseconds, the DNA double helix unwinds to form a node known as the transcription bubble, so that one exposed DNA strand can be copied into a complementary RNA strand.

An unprecedented view Darst was the first to describe the structure of bacterial RNAP, and teasing out its finer points has remained a major focus of his lab. While decades of work have established that RNAP binding to a specific sequence of DNA triggers a series of steps that open the bubble, how RNAP separates the strands and positions one strand in its active site remains hotly debated.

For the first time, a clear picture of the structural changes and intermediates that form during the initial stages of RNA polymerase binding to DNA snapped into focus.

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