Study investigates the antigenic and viral receptor-binding properties of major Omicron BA.2.75 subvariants

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Study investigates the antigenic and viral receptor-binding properties of major Omicron BA.2.75 subvariants
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Study investigates the antigenic and viral receptor-binding properties of major Omicron BA.2.75 subvariants biorxivpreprint ColumbiaPS UMich Omicron COVID19 coronavirus covid viral SARSCoV2 virus

By Tarun Sai LomteMar 28 2023Reviewed by Lily Ramsey, LLM *Important notice: bioRxiv publishes preliminary scientific reports that are not peer-reviewed and, therefore, should not be regarded as conclusive, guide clinical practice/health-related behavior, or treated as established information.

Further, BA.2.75-derived sub-variants are relatively diverse and have different evolutionary pathways. CH.1.1 and BN.1 are the most frequently observed sub-variants of Omicron BA.2.75. Several BA.2.75 sub-variants, including DS.1, CH.1, and CH.1.1, exhibited lower affinity than BA.2.75. Additional single substitutions in the BA.2.75 spike enhanced binding affinity.

BN.1 was relatively resistant to a few class 3 RBD mAbs. Notably, CH.1.1, CH.1, DS.1, BM.4.1.1, and BA.2.75.2 were highly resistant to neutralization by class 1 and class 2 RBD mAbs and most class 3 mAbs. Besides, BM.4.1, BM.4.1.1, CH.1, BN.1, DS.1, and BL.1 sub-variants significantly impaired neutralizing activity. The authors observed a similar trend for sera from bivalent vaccine recipients and BA.2 and BA.4/5 breakthrough cohorts. CH.1, DS.1, and CH.1.1 displayed substantially stronger evasion, while BN.1, BA.2.75.2, BL.1, BM.4.1.1 exhibited moderately higher evasion than BA.2.75.

BA.2.75.2 was 5.07 AUs from bivalent vaccine-boosted sera and 1.96 AU away from BA.4/5, suggesting an evasion advantage over BA.4/5. In addition, DS.1, CH.1.1, and CH.1 were 6.4, 6.75, and 6.09 AUs from the bivalent sera, respectively, similar to that for XBB.1.5 . The BA.2.75 sub-variants formed two antigenically distinct clusters; one set clustered with BQ sub-variants and the other with XBB sub-variants.

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